Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC24.18■■□□□ 1.46
NINLQ9Y2I6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NINLQ9Y2I6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NINLQ9Y2I6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NINLQ9Y2I6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC24.18■■□□□ 1.46
NINLQ9Y2I6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
NINLQ9Y2I6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NINLQ9Y2I6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
NINLQ9Y2I6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 AC136632.2-201ENST00000512891 861 ntBASIC24.17■■□□□ 1.46
NINLQ9Y2I6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 AP001160.2-201ENST00000596071 487 ntBASIC24.17■■□□□ 1.46
NINLQ9Y2I6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC24.17■■□□□ 1.46
NINLQ9Y2I6 AC104109.2-201ENST00000602919 1418 ntBASIC24.17■■□□□ 1.46
NINLQ9Y2I6 ABALON-201ENST00000629058 1903 ntBASIC24.17■■□□□ 1.46
NINLQ9Y2I6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 ELK2BP-201ENST00000415014 1224 ntBASIC24.16■■□□□ 1.46
NINLQ9Y2I6 SIGLEC30P-201ENST00000455569 941 ntBASIC24.16■■□□□ 1.46
NINLQ9Y2I6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 AL591424.1-201ENST00000442569 1213 ntBASIC24.16■■□□□ 1.46
NINLQ9Y2I6 RNA5SP415-201ENST00000517246 115 ntBASIC24.16■■□□□ 1.46
NINLQ9Y2I6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 MIR1199-201ENST00000621445 119 ntBASIC24.16■■□□□ 1.46
NINLQ9Y2I6 AC055717.3-201ENST00000622967 595 ntBASIC24.16■■□□□ 1.46
NINLQ9Y2I6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
NINLQ9Y2I6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 AC004817.3-201ENST00000602957 2129 ntBASIC24.15■■□□□ 1.46
NINLQ9Y2I6 FAM197Y3-203ENST00000618346 717 ntBASIC24.15■■□□□ 1.46
NINLQ9Y2I6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NINLQ9Y2I6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
NINLQ9Y2I6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
NINLQ9Y2I6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
NINLQ9Y2I6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 STK19B-204ENST00000512515 211 ntBASIC24.14■■□□□ 1.45
NINLQ9Y2I6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC24.14■■□□□ 1.45
NINLQ9Y2I6 NEFHP1-201ENST00000412845 2629 ntBASIC24.14■■□□□ 1.45
NINLQ9Y2I6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms