Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 AL391005.1-201ENST00000623953 2435 ntBASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 MIR1238-201ENST00000408483 83 ntBASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 MIR3180-4-201ENST00000582223 153 ntBASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB4Q9UN71 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 AC007663.1-201ENST00000438948 1240 ntBASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 AC128688.1-201ENST00000487626 519 ntBASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 AC104390.1-201ENST00000555663 520 ntBASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 AC010653.2-201ENST00000623505 997 ntBASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 PCDHB19P-201ENST00000570871 2371 ntBASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB4Q9UN71 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 LINC00602-201ENST00000629776 2065 ntBASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms