Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPA4Q9UI42 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPA4Q9UI42 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPA4Q9UI42 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 LINC00628-201ENST00000628516 1289 ntBASIC20.11■□□□□ 0.81
CPA4Q9UI42 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPA4Q9UI42 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPA4Q9UI42 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPA4Q9UI42 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPA4Q9UI42 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPA4Q9UI42 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPA4Q9UI42 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CPA4Q9UI42 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 LINC00982-205ENST00000420957 435 ntBASIC20.1■□□□□ 0.81
CPA4Q9UI42 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 STK25P1-201ENST00000585406 838 ntBASIC20.1■□□□□ 0.81
CPA4Q9UI42 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 AC068137.2-201ENST00000605408 478 ntBASIC20.1■□□□□ 0.81
CPA4Q9UI42 REXO1L3P-201ENST00000622202 1288 ntBASIC20.1■□□□□ 0.81
CPA4Q9UI42 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPA4Q9UI42 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
CPA4Q9UI42 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 AC023141.5-201ENST00000458585 616 ntBASIC20.09■□□□□ 0.81
CPA4Q9UI42 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 AC092919.2-201ENST00000623631 1645 ntBASIC20.09■□□□□ 0.81
CPA4Q9UI42 AC116562.4-201ENST00000641316 2276 ntBASIC20.09■□□□□ 0.81
CPA4Q9UI42 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CPA4Q9UI42 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPA4Q9UI42 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPA4Q9UI42 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CPA4Q9UI42 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.08■□□□□ 0.81
CPA4Q9UI42 PI4KAP1-204ENST00000612579 1703 ntBASIC20.08■□□□□ 0.81
CPA4Q9UI42 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPA4Q9UI42 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPA4Q9UI42 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPA4Q9UI42 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPA4Q9UI42 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.08■□□□□ 0.81
CPA4Q9UI42 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.08■□□□□ 0.81
CPA4Q9UI42 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.08■□□□□ 0.81
CPA4Q9UI42 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPA4Q9UI42 CXCL1P1-201ENST00000502804 216 ntBASIC20.08■□□□□ 0.81
CPA4Q9UI42 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.08■□□□□ 0.81
CPA4Q9UI42 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.08■□□□□ 0.81
CPA4Q9UI42 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms