Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 AP002414.3-201ENST00000589352 1468 ntBASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 PRYP5-201ENST00000451909 266 ntBASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 Z83851.2-201ENST00000609564 659 ntBASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 AC027601.4-201ENST00000611259 610 ntBASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.12■□□□□ 0.33
LRIT1Q9P2V4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 AC090164.3-201ENST00000610780 2143 ntBASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 SPDYE21P-201ENST00000413323 827 ntBASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 AC034105.1-201ENST00000563488 319 ntBASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 AC116407.2-201ENST00000613639 860 ntBASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 SIGLEC16-201ENST00000599858 1437 ntBASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.11■□□□□ 0.33
LRIT1Q9P2V4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 AC139530.3-201ENST00000620344 690 ntBASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT1Q9P2V4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms