Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 KRT18P22-201ENST00000402024 1347 ntBASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 AC211429.1-201ENST00000415277 523 ntBASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 ECEL1P3-201ENST00000427961 737 ntBASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 MIR3180-5-201ENST00000583743 153 ntBASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 AL391005.1-201ENST00000623953 2435 ntBASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 AL109659.2-201ENST00000606809 1674 ntBASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCF3Q9NUQ8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ABCF3Q9NUQ8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.08■□□□□ 0.49
ABCF3Q9NUQ8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.08■□□□□ 0.49
ABCF3Q9NUQ8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.08■□□□□ 0.49
ABCF3Q9NUQ8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
ABCF3Q9NUQ8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ABCF3Q9NUQ8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.08■□□□□ 0.49
ABCF3Q9NUQ8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ABCF3Q9NUQ8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ABCF3Q9NUQ8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ABCF3Q9NUQ8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 CR769767.2-201ENST00000622735 460 ntBASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
ABCF3Q9NUQ8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 LIN28AP1-201ENST00000429574 405 ntBASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 ATP5G1P1-201ENST00000448724 379 ntBASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 FAM87A-204ENST00000613235 858 ntBASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCF3Q9NUQ8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms