Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 TP73-AS1-210ENST00000637775 1455 ntBASIC18.93■□□□□ 0.62
CISHQ9NSE2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 HCG11-201ENST00000411553 5696 ntBASIC18.93■□□□□ 0.62
CISHQ9NSE2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.93■□□□□ 0.62
CISHQ9NSE2 LINC00304-203ENST00000565008 1864 ntBASIC18.92■□□□□ 0.62
CISHQ9NSE2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 AC096582.2-201ENST00000510860 516 ntBASIC18.92■□□□□ 0.62
CISHQ9NSE2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 AC011467.2-201ENST00000598425 242 ntBASIC18.92■□□□□ 0.62
CISHQ9NSE2 AC099336.1-202ENST00000602961 463 ntBASIC18.92■□□□□ 0.62
CISHQ9NSE2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 PCDHB18P-201ENST00000524813 2368 ntBASIC18.92■□□□□ 0.62
CISHQ9NSE2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.92■□□□□ 0.62
CISHQ9NSE2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CISHQ9NSE2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 FAM220CP-201ENST00000395253 831 ntBASIC18.91■□□□□ 0.62
CISHQ9NSE2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 MIR3652-201ENST00000579335 131 ntBASIC18.91■□□□□ 0.62
CISHQ9NSE2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 HTR7P1-202ENST00000624664 4411 ntBASIC18.91■□□□□ 0.62
CISHQ9NSE2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.91■□□□□ 0.62
CISHQ9NSE2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 LINC00896-202ENST00000609602 2128 ntBASIC18.91■□□□□ 0.62
CISHQ9NSE2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CISHQ9NSE2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CISHQ9NSE2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CISHQ9NSE2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CISHQ9NSE2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CISHQ9NSE2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CISHQ9NSE2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CISHQ9NSE2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms