Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
SSU72Q9NP77 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSU72Q9NP77 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSU72Q9NP77 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSU72Q9NP77 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSU72Q9NP77 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSU72Q9NP77 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.61■□□□□ 0.41
SSU72Q9NP77 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSU72Q9NP77 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 AC007663.1-201ENST00000438948 1240 ntBASIC17.61■□□□□ 0.41
SSU72Q9NP77 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 MIR3917-201ENST00000580971 93 ntBASIC17.61■□□□□ 0.41
SSU72Q9NP77 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSU72Q9NP77 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSU72Q9NP77 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSU72Q9NP77 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
SSU72Q9NP77 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 ABHD17AP1-201ENST00000358206 933 ntBASIC17.6■□□□□ 0.41
SSU72Q9NP77 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.6■□□□□ 0.41
SSU72Q9NP77 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 AC010653.2-201ENST00000623505 997 ntBASIC17.6■□□□□ 0.41
SSU72Q9NP77 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SSU72Q9NP77 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSU72Q9NP77 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 AC046158.3-201ENST00000624947 2558 ntBASIC17.59■□□□□ 0.41
SSU72Q9NP77 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 AP001412.1-201ENST00000608405 714 ntBASIC17.59■□□□□ 0.41
SSU72Q9NP77 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 AC116562.4-202ENST00000641738 218 ntBASIC17.59■□□□□ 0.41
SSU72Q9NP77 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSU72Q9NP77 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SSU72Q9NP77 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SSU72Q9NP77 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SSU72Q9NP77 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.58■□□□□ 0.41
SSU72Q9NP77 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SSU72Q9NP77 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SSU72Q9NP77 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSU72Q9NP77 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms