Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SP110Q9HB58 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.21■□□□□ 0.51
SP110Q9HB58 AC091607.1-201ENST00000490318 1060 ntBASIC18.21■□□□□ 0.51
SP110Q9HB58 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.21■□□□□ 0.51
SP110Q9HB58 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SP110Q9HB58 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SP110Q9HB58 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.21■□□□□ 0.51
SP110Q9HB58 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SP110Q9HB58 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SP110Q9HB58 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.21■□□□□ 0.51
SP110Q9HB58 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.21■□□□□ 0.51
SP110Q9HB58 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SP110Q9HB58 AC012317.2-201ENST00000623305 2251 ntBASIC18.21■□□□□ 0.51
SP110Q9HB58 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SP110Q9HB58 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SP110Q9HB58 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SP110Q9HB58 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SP110Q9HB58 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SP110Q9HB58 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.21■□□□□ 0.51
SP110Q9HB58 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SP110Q9HB58 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.21■□□□□ 0.51
SP110Q9HB58 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
SP110Q9HB58 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
SP110Q9HB58 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.21■□□□□ 0.5
SP110Q9HB58 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.2■□□□□ 0.5
SP110Q9HB58 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 AL133373.2-201ENST00000623187 2828 ntBASIC18.2■□□□□ 0.5
SP110Q9HB58 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SP110Q9HB58 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SP110Q9HB58 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 HCG4P8-203ENST00000443049 980 ntBASIC18.2■□□□□ 0.5
SP110Q9HB58 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.2■□□□□ 0.5
SP110Q9HB58 AC074051.2-201ENST00000565115 352 ntBASIC18.2■□□□□ 0.5
SP110Q9HB58 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.2■□□□□ 0.5
SP110Q9HB58 AC005336.2-201ENST00000593183 939 ntBASIC18.2■□□□□ 0.5
SP110Q9HB58 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.2■□□□□ 0.5
SP110Q9HB58 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.2■□□□□ 0.5
SP110Q9HB58 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.2■□□□□ 0.5
SP110Q9HB58 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.2■□□□□ 0.5
SP110Q9HB58 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.2■□□□□ 0.5
SP110Q9HB58 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SP110Q9HB58 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.19■□□□□ 0.5
SP110Q9HB58 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.19■□□□□ 0.5
SP110Q9HB58 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.19■□□□□ 0.5
SP110Q9HB58 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SP110Q9HB58 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 DDX43P3-201ENST00000441064 443 ntBASIC18.19■□□□□ 0.5
SP110Q9HB58 KRT17P6-201ENST00000453795 1220 ntBASIC18.19■□□□□ 0.5
SP110Q9HB58 MINOS1P3-201ENST00000457048 203 ntBASIC18.19■□□□□ 0.5
SP110Q9HB58 AC104819.1-201ENST00000504587 486 ntBASIC18.19■□□□□ 0.5
SP110Q9HB58 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.19■□□□□ 0.5
SP110Q9HB58 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.19■□□□□ 0.5
SP110Q9HB58 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.19■□□□□ 0.5
SP110Q9HB58 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.19■□□□□ 0.5
SP110Q9HB58 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 AP005901.3-202ENST00000581653 237 ntBASIC18.19■□□□□ 0.5
SP110Q9HB58 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SP110Q9HB58 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SP110Q9HB58 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SP110Q9HB58 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SP110Q9HB58 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP110Q9HB58 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.18■□□□□ 0.5
SP110Q9HB58 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.18■□□□□ 0.5
SP110Q9HB58 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.18■□□□□ 0.5
SP110Q9HB58 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.18■□□□□ 0.5
SP110Q9HB58 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP110Q9HB58 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SP110Q9HB58 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP110Q9HB58 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SP110Q9HB58 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SP110Q9HB58 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP110Q9HB58 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP110Q9HB58 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP110Q9HB58 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.18■□□□□ 0.5
SP110Q9HB58 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms