Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17■□□□□ 0.31
PIF1Q9H611 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17■□□□□ 0.31
PIF1Q9H611 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PIF1Q9H611 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
PIF1Q9H611 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PIF1Q9H611 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17■□□□□ 0.31
PIF1Q9H611 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17■□□□□ 0.31
PIF1Q9H611 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PIF1Q9H611 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PIF1Q9H611 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PIF1Q9H611 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PIF1Q9H611 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.99■□□□□ 0.31
PIF1Q9H611 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.99■□□□□ 0.31
PIF1Q9H611 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
PIF1Q9H611 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PIF1Q9H611 UNC93B2-201ENST00000285383 730 ntBASIC16.99■□□□□ 0.31
PIF1Q9H611 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PIF1Q9H611 SNORA78-201ENST00000459373 127 ntBASIC16.99■□□□□ 0.31
PIF1Q9H611 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.99■□□□□ 0.31
PIF1Q9H611 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.99■□□□□ 0.31
PIF1Q9H611 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PIF1Q9H611 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.99■□□□□ 0.31
PIF1Q9H611 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PIF1Q9H611 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PIF1Q9H611 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PIF1Q9H611 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.98■□□□□ 0.31
PIF1Q9H611 AC133963.1-201ENST00000504166 1679 ntBASIC16.98■□□□□ 0.31
PIF1Q9H611 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.98■□□□□ 0.31
PIF1Q9H611 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.98■□□□□ 0.31
PIF1Q9H611 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.98■□□□□ 0.31
PIF1Q9H611 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PIF1Q9H611 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 AC112497.1-201ENST00000624824 639 ntBASIC16.98■□□□□ 0.31
PIF1Q9H611 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
PIF1Q9H611 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PIF1Q9H611 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
PIF1Q9H611 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PIF1Q9H611 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PIF1Q9H611 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PIF1Q9H611 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PIF1Q9H611 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PIF1Q9H611 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PIF1Q9H611 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 KRT8P7-201ENST00000533003 1432 ntBASIC16.97■□□□□ 0.31
PIF1Q9H611 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms