Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB1Q9H4B7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 KRT18P48-201ENST00000434763 852 ntBASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB1Q9H4B7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 TSPY12P-201ENST00000421279 868 ntBASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 COX11P1-201ENST00000489116 835 ntBASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 AC011558.1-201ENST00000623459 338 ntBASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBB1Q9H4B7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBB1Q9H4B7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.08■□□□□ 0.33
TUBB1Q9H4B7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBB1Q9H4B7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 BX276092.7-203ENST00000637198 1536 ntBASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 STARP1-201ENST00000397973 869 ntBASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 AC093827.2-201ENST00000512654 315 ntBASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBB1Q9H4B7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms