Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
SMOQ99835 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMOQ99835 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMOQ99835 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SMOQ99835 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.59■□□□□ 0.57
SMOQ99835 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMOQ99835 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.59■□□□□ 0.57
SMOQ99835 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SMOQ99835 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMOQ99835 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
SMOQ99835 FDX1P1-201ENST00000449115 551 ntBASIC18.59■□□□□ 0.57
SMOQ99835 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMOQ99835 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.59■□□□□ 0.57
SMOQ99835 AC109462.3-201ENST00000573934 613 ntBASIC18.59■□□□□ 0.57
SMOQ99835 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.59■□□□□ 0.57
SMOQ99835 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMOQ99835 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.59■□□□□ 0.57
SMOQ99835 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMOQ99835 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SMOQ99835 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.59■□□□□ 0.57
SMOQ99835 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMOQ99835 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SMOQ99835 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.59■□□□□ 0.57
SMOQ99835 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.58■□□□□ 0.57
SMOQ99835 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SMOQ99835 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.58■□□□□ 0.57
SMOQ99835 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMOQ99835 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.58■□□□□ 0.57
SMOQ99835 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.58■□□□□ 0.57
SMOQ99835 MRPL3P1-201ENST00000400109 1033 ntBASIC18.58■□□□□ 0.56
SMOQ99835 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.58■□□□□ 0.56
SMOQ99835 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.58■□□□□ 0.56
SMOQ99835 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.58■□□□□ 0.56
SMOQ99835 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMOQ99835 SART3-203ENST00000546611 1184 ntBASIC18.58■□□□□ 0.56
SMOQ99835 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.58■□□□□ 0.56
SMOQ99835 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SMOQ99835 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.58■□□□□ 0.56
SMOQ99835 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.58■□□□□ 0.56
SMOQ99835 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMOQ99835 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMOQ99835 AC073592.5-201ENST00000624854 528 ntBASIC18.58■□□□□ 0.56
SMOQ99835 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMOQ99835 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMOQ99835 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMOQ99835 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
SMOQ99835 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.58■□□□□ 0.56
SMOQ99835 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SMOQ99835 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMOQ99835 AC132938.5-201ENST00000624980 1813 ntBASIC18.58■□□□□ 0.56
SMOQ99835 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.58■□□□□ 0.56
SMOQ99835 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMOQ99835 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SMOQ99835 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.57■□□□□ 0.56
SMOQ99835 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.57■□□□□ 0.56
SMOQ99835 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.57■□□□□ 0.56
SMOQ99835 AC005104.2-201ENST00000427818 678 ntBASIC18.57■□□□□ 0.56
SMOQ99835 FAM197Y8-203ENST00000450145 560 ntBASIC18.57■□□□□ 0.56
SMOQ99835 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.57■□□□□ 0.56
SMOQ99835 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.57■□□□□ 0.56
SMOQ99835 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.57■□□□□ 0.56
SMOQ99835 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 SLC25A6P4-201ENST00000586535 553 ntBASIC18.57■□□□□ 0.56
SMOQ99835 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.57■□□□□ 0.56
SMOQ99835 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.57■□□□□ 0.56
SMOQ99835 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SMOQ99835 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMOQ99835 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.57■□□□□ 0.56
SMOQ99835 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SMOQ99835 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SMOQ99835 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms