Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP4Q99569 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP4Q99569 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PKP4Q99569 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 AC246785.2-201ENST00000432512 513 ntBASIC17.29■□□□□ 0.36
PKP4Q99569 ATP5G2P1-201ENST00000433580 426 ntBASIC17.29■□□□□ 0.36
PKP4Q99569 TOB2P1-201ENST00000469761 992 ntBASIC17.29■□□□□ 0.36
PKP4Q99569 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.29■□□□□ 0.36
PKP4Q99569 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
PKP4Q99569 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP4Q99569 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP4Q99569 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.29■□□□□ 0.36
PKP4Q99569 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PKP4Q99569 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.29■□□□□ 0.36
PKP4Q99569 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PKP4Q99569 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP4Q99569 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 AC125634.1-201ENST00000438758 1403 ntBASIC17.29■□□□□ 0.36
PKP4Q99569 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP4Q99569 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PKP4Q99569 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PKP4Q99569 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.28■□□□□ 0.36
PKP4Q99569 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP4Q99569 AC097374.2-201ENST00000618617 1306 ntBASIC17.28■□□□□ 0.36
PKP4Q99569 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.28■□□□□ 0.36
PKP4Q99569 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.28■□□□□ 0.36
PKP4Q99569 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PKP4Q99569 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 LINC00265-3P-201ENST00000447588 903 ntBASIC17.28■□□□□ 0.36
PKP4Q99569 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.28■□□□□ 0.36
PKP4Q99569 VENTXP7-201ENST00000475503 772 ntBASIC17.28■□□□□ 0.36
PKP4Q99569 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP4Q99569 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 AC092119.3-201ENST00000612618 583 ntBASIC17.28■□□□□ 0.36
PKP4Q99569 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.28■□□□□ 0.36
PKP4Q99569 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PKP4Q99569 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PKP4Q99569 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP4Q99569 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.28■□□□□ 0.36
PKP4Q99569 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP4Q99569 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PKP4Q99569 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP4Q99569 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP4Q99569 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP4Q99569 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.28■□□□□ 0.36
PKP4Q99569 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PKP4Q99569 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP4Q99569 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.27■□□□□ 0.36
PKP4Q99569 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PKP4Q99569 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
PKP4Q99569 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.27■□□□□ 0.36
PKP4Q99569 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PKP4Q99569 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.27■□□□□ 0.36
PKP4Q99569 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.27■□□□□ 0.36
PKP4Q99569 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP4Q99569 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PKP4Q99569 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP4Q99569 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP4Q99569 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP4Q99569 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PKP4Q99569 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.27■□□□□ 0.36
PKP4Q99569 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PKP4Q99569 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.27■□□□□ 0.36
PKP4Q99569 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.27■□□□□ 0.36
PKP4Q99569 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.27■□□□□ 0.36
PKP4Q99569 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.27■□□□□ 0.36
PKP4Q99569 AL138831.2-201ENST00000606564 490 ntBASIC17.27■□□□□ 0.36
PKP4Q99569 AL355312.1-201ENST00000407115 2176 ntBASIC17.27■□□□□ 0.36
PKP4Q99569 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms