Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 AC125634.1-201ENST00000438758 1403 ntBASIC17.92■□□□□ 0.46
PHOX2BQ99453 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 FAM58CP-201ENST00000435741 640 ntBASIC17.92■□□□□ 0.46
PHOX2BQ99453 HCG4B-203ENST00000450128 991 ntBASIC17.92■□□□□ 0.46
PHOX2BQ99453 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 MIR4751-201ENST00000578027 74 ntBASIC17.92■□□□□ 0.46
PHOX2BQ99453 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 AL513210.1-201ENST00000629608 234 ntBASIC17.92■□□□□ 0.46
PHOX2BQ99453 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PHOX2BQ99453 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
PHOX2BQ99453 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
PHOX2BQ99453 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.91■□□□□ 0.46
PHOX2BQ99453 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.91■□□□□ 0.46
PHOX2BQ99453 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.91■□□□□ 0.46
PHOX2BQ99453 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.91■□□□□ 0.46
PHOX2BQ99453 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PHOX2BQ99453 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
PHOX2BQ99453 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.91■□□□□ 0.46
PHOX2BQ99453 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHOX2BQ99453 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 AC004817.3-201ENST00000602957 2129 ntBASIC17.9■□□□□ 0.46
PHOX2BQ99453 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 VN2R19P-201ENST00000442399 1052 ntBASIC17.9■□□□□ 0.46
PHOX2BQ99453 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHOX2BQ99453 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.9■□□□□ 0.46
PHOX2BQ99453 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PHOX2BQ99453 AC005332.7-201ENST00000614046 2005 ntBASIC17.89■□□□□ 0.46
PHOX2BQ99453 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHOX2BQ99453 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.89■□□□□ 0.45
PHOX2BQ99453 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms