Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 KRT8P47-201ENST00000604727 1398 ntBASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 MIR1199-201ENST00000621445 119 ntBASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.12■□□□□ 0.81
SYNGAP1Q96PV0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 AC073621.1-201ENST00000392730 636 ntBASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 AC004832.2-201ENST00000426397 482 ntBASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 AL139424.1-201ENST00000607572 797 ntBASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 AC009113.1-201ENST00000570267 2443 ntBASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SYNGAP1Q96PV0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 MIR3687-2-201ENST00000577708 61 ntBASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 MIR3687-1-201ENST00000614492 61 ntBASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 AC005593.1-201ENST00000624894 515 ntBASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SYNGAP1Q96PV0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 AC007967.2-201ENST00000432613 625 ntBASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 AC244107.1-201ENST00000442033 332 ntBASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 DUTP2-201ENST00000519164 463 ntBASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 AC002347.1-201ENST00000569543 541 ntBASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.09■□□□□ 0.81
SYNGAP1Q96PV0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms