Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.81■□□□□ 0.28
COL21A1Q96P44 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
COL21A1Q96P44 AC124067.4-201ENST00000519691 2379 ntBASIC16.81■□□□□ 0.28
COL21A1Q96P44 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.81■□□□□ 0.28
COL21A1Q96P44 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 AL445228.2-201ENST00000605589 952 ntBASIC16.8■□□□□ 0.28
COL21A1Q96P44 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 AL121956.5-201ENST00000625261 221 ntBASIC16.8■□□□□ 0.28
COL21A1Q96P44 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL21A1Q96P44 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COL21A1Q96P44 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 ARMC10P1-201ENST00000313754 855 ntBASIC16.79■□□□□ 0.28
COL21A1Q96P44 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 KRT18P48-201ENST00000434763 852 ntBASIC16.79■□□□□ 0.28
COL21A1Q96P44 VENTXP5-201ENST00000523979 775 ntBASIC16.79■□□□□ 0.28
COL21A1Q96P44 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 AC141586.5-201ENST00000624546 2050 ntBASIC16.79■□□□□ 0.28
COL21A1Q96P44 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COL21A1Q96P44 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL21A1Q96P44 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
COL21A1Q96P44 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.78■□□□□ 0.28
COL21A1Q96P44 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.78■□□□□ 0.28
COL21A1Q96P44 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms