Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 CNN2P2-201ENST00000443536 909 ntBASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 CNN2P3-201ENST00000450201 906 ntBASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 AL136317.3-201ENST00000618497 906 ntBASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 KRT19P2-202ENST00000557173 1012 ntBASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 AC006333.2-201ENST00000607957 2099 ntBASIC16.92■□□□□ 0.3
CNTNAP3BQ96NU0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 AP000974.1-201ENST00000623909 2387 ntBASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 AC074386.1-202ENST00000463561 864 ntBASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 SLC25A39P2-201ENST00000537614 270 ntBASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 SPDYE22P-201ENST00000582158 798 ntBASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 AL353135.1-201ENST00000606729 504 ntBASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNTNAP3BQ96NU0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms