Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 DNAJB3-202ENST00000449667 1266 ntBASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 MIR1199-201ENST00000621445 119 ntBASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 AL022326.1-202ENST00000641533 845 ntBASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 AC079776.2-201ENST00000641154 1609 ntBASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 AC022898.2-201ENST00000616822 1312 ntBASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC46A1Q96NT5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 AC211486.1-202ENST00000416371 468 ntBASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 AC211476.1-201ENST00000503899 468 ntBASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC46A1Q96NT5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 KRT18P27-201ENST00000427733 1299 ntBASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 AC007967.3-201ENST00000434308 558 ntBASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 BX005266.1-201ENST00000473402 457 ntBASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 AC006557.2-201ENST00000592985 1240 ntBASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 AC005593.1-201ENST00000624894 515 ntBASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms