Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 AC105339.3-201ENST00000560043 636 ntBASIC20.74■□□□□ 0.91
TRIM47Q96LD4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM47Q96LD4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.73■□□□□ 0.91
TRIM47Q96LD4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 AC023274.1-201ENST00000418278 595 ntBASIC20.73■□□□□ 0.91
TRIM47Q96LD4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 MTCL1P1-201ENST00000446207 792 ntBASIC20.73■□□□□ 0.91
TRIM47Q96LD4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 AC002347.1-201ENST00000569543 541 ntBASIC20.73■□□□□ 0.91
TRIM47Q96LD4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 BICD1-207ENST00000551848 1962 ntBASIC20.73■□□□□ 0.91
TRIM47Q96LD4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM47Q96LD4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 AL499627.1-201ENST00000569373 2188 ntBASIC20.72■□□□□ 0.91
TRIM47Q96LD4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 AC008687.5-201ENST00000593746 558 ntBASIC20.72■□□□□ 0.91
TRIM47Q96LD4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 AL139288.1-201ENST00000623748 933 ntBASIC20.72■□□□□ 0.91
TRIM47Q96LD4 AC107918.4-202ENST00000641623 219 ntBASIC20.72■□□□□ 0.91
TRIM47Q96LD4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms