Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALPK3Q96L96 AC008677.1-201ENST00000519230 1561 ntBASIC19.18■□□□□ 0.66
ALPK3Q96L96 AL032819.2-201ENST00000624543 2162 ntBASIC19.18■□□□□ 0.66
ALPK3Q96L96 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.18■□□□□ 0.66
ALPK3Q96L96 AC004890.2-204ENST00000481968 304 ntBASIC19.18■□□□□ 0.66
ALPK3Q96L96 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.18■□□□□ 0.66
ALPK3Q96L96 AL158211.3-201ENST00000607385 239 ntBASIC19.18■□□□□ 0.66
ALPK3Q96L96 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALPK3Q96L96 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALPK3Q96L96 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALPK3Q96L96 AC097637.2-201ENST00000624096 1997 ntBASIC19.18■□□□□ 0.66
ALPK3Q96L96 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ALPK3Q96L96 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.18■□□□□ 0.66
ALPK3Q96L96 AC018445.3-201ENST00000624177 1945 ntBASIC19.18■□□□□ 0.66
ALPK3Q96L96 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.17■□□□□ 0.66
ALPK3Q96L96 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALPK3Q96L96 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.17■□□□□ 0.66
ALPK3Q96L96 AL132655.2-201ENST00000596276 594 ntBASIC19.17■□□□□ 0.66
ALPK3Q96L96 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.17■□□□□ 0.66
ALPK3Q96L96 IGHV3-72-202ENST00000621503 303 ntBASIC19.17■□□□□ 0.66
ALPK3Q96L96 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALPK3Q96L96 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.17■□□□□ 0.66
ALPK3Q96L96 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ALPK3Q96L96 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
ALPK3Q96L96 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALPK3Q96L96 AC009336.1-201ENST00000608941 1553 ntBASIC19.17■□□□□ 0.66
ALPK3Q96L96 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALPK3Q96L96 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.17■□□□□ 0.66
ALPK3Q96L96 U91328.1-201ENST00000437528 223 ntBASIC19.17■□□□□ 0.66
ALPK3Q96L96 SPDYE14P-201ENST00000442619 822 ntBASIC19.17■□□□□ 0.66
ALPK3Q96L96 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.17■□□□□ 0.66
ALPK3Q96L96 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.17■□□□□ 0.66
ALPK3Q96L96 AL512356.2-201ENST00000546955 174 ntBASIC19.17■□□□□ 0.66
ALPK3Q96L96 CR383656.12-201ENST00000549567 513 ntBASIC19.17■□□□□ 0.66
ALPK3Q96L96 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALPK3Q96L96 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
ALPK3Q96L96 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALPK3Q96L96 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALPK3Q96L96 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ALPK3Q96L96 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALPK3Q96L96 AC079140.1-201ENST00000508039 487 ntBASIC19.16■□□□□ 0.66
ALPK3Q96L96 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALPK3Q96L96 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.16■□□□□ 0.66
ALPK3Q96L96 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
ALPK3Q96L96 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALPK3Q96L96 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALPK3Q96L96 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ALPK3Q96L96 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALPK3Q96L96 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALPK3Q96L96 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 AC005237.2-201ENST00000434368 219 ntBASIC19.15■□□□□ 0.66
ALPK3Q96L96 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 HILS1-202ENST00000545329 423 ntBASIC19.15■□□□□ 0.66
ALPK3Q96L96 AC243562.1-201ENST00000560672 389 ntBASIC19.15■□□□□ 0.66
ALPK3Q96L96 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 AL358472.5-202ENST00000641448 1267 ntBASIC19.15■□□□□ 0.66
ALPK3Q96L96 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALPK3Q96L96 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.15■□□□□ 0.66
ALPK3Q96L96 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
ALPK3Q96L96 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ALPK3Q96L96 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ALPK3Q96L96 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ALPK3Q96L96 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms