Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RITA1Q96K30 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.26□□□□□ -0.13
RITA1Q96K30 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RITA1Q96K30 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RITA1Q96K30 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.26□□□□□ -0.13
RITA1Q96K30 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RITA1Q96K30 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RITA1Q96K30 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RITA1Q96K30 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
RITA1Q96K30 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RITA1Q96K30 AL121672.3-201ENST00000608644 468 ntBASIC14.26□□□□□ -0.13
RITA1Q96K30 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RITA1Q96K30 LINC00304-203ENST00000565008 1864 ntBASIC14.26□□□□□ -0.13
RITA1Q96K30 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.26□□□□□ -0.13
RITA1Q96K30 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RITA1Q96K30 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.26□□□□□ -0.13
RITA1Q96K30 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RITA1Q96K30 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.26□□□□□ -0.13
RITA1Q96K30 AC010460.3-201ENST00000511359 1579 ntBASIC14.26□□□□□ -0.13
RITA1Q96K30 AC141586.5-201ENST00000624546 2050 ntBASIC14.26□□□□□ -0.13
RITA1Q96K30 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RITA1Q96K30 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.25□□□□□ -0.13
RITA1Q96K30 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.25□□□□□ -0.13
RITA1Q96K30 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RITA1Q96K30 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.25□□□□□ -0.13
RITA1Q96K30 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.25□□□□□ -0.13
RITA1Q96K30 CHCHD2P8-201ENST00000429873 447 ntBASIC14.25□□□□□ -0.13
RITA1Q96K30 AP002383.4-201ENST00000442518 975 ntBASIC14.25□□□□□ -0.13
RITA1Q96K30 TSSC2-201ENST00000450217 709 ntBASIC14.25□□□□□ -0.13
RITA1Q96K30 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.25□□□□□ -0.13
RITA1Q96K30 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.25□□□□□ -0.13
RITA1Q96K30 AL353801.3-201ENST00000609898 542 ntBASIC14.25□□□□□ -0.13
RITA1Q96K30 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RITA1Q96K30 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.25□□□□□ -0.13
RITA1Q96K30 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.25□□□□□ -0.13
RITA1Q96K30 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RITA1Q96K30 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.24□□□□□ -0.13
RITA1Q96K30 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.24□□□□□ -0.13
RITA1Q96K30 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
RITA1Q96K30 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.24□□□□□ -0.13
RITA1Q96K30 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RITA1Q96K30 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.24□□□□□ -0.13
RITA1Q96K30 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RITA1Q96K30 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 DDX43P3-201ENST00000441064 443 ntBASIC14.24□□□□□ -0.13
RITA1Q96K30 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RITA1Q96K30 AC011840.4-201ENST00000578471 627 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms