Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15□□□□□ -0.01
SPG11Q96JI7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SPG11Q96JI7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15□□□□□ -0.01
SPG11Q96JI7 FZD10-202ENST00000539839 3282 ntBASIC15□□□□□ -0.01
SPG11Q96JI7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SPG11Q96JI7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15□□□□□ -0.01
SPG11Q96JI7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 SPDYE21P-201ENST00000413323 827 ntBASIC15□□□□□ -0.01
SPG11Q96JI7 AC092474.2-201ENST00000424288 719 ntBASIC15□□□□□ -0.01
SPG11Q96JI7 IGHV3-65-201ENST00000523210 341 ntBASIC15□□□□□ -0.01
SPG11Q96JI7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15□□□□□ -0.01
SPG11Q96JI7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15□□□□□ -0.01
SPG11Q96JI7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 IGLL3P-201ENST00000412472 434 ntBASIC14.99□□□□□ -0.01
SPG11Q96JI7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 FAM58CP-201ENST00000435741 640 ntBASIC14.99□□□□□ -0.01
SPG11Q96JI7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPG11Q96JI7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.99□□□□□ -0.01
SPG11Q96JI7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 AC002472.2-201ENST00000442739 958 ntBASIC14.98□□□□□ -0.01
SPG11Q96JI7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 AC004835.2-201ENST00000603762 682 ntBASIC14.98□□□□□ -0.01
SPG11Q96JI7 AC010507.1-201ENST00000633895 436 ntBASIC14.98□□□□□ -0.01
SPG11Q96JI7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 AL049757.1-201ENST00000616842 1596 ntBASIC14.98□□□□□ -0.01
SPG11Q96JI7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 AC132938.5-201ENST00000624980 1813 ntBASIC14.98□□□□□ -0.01
SPG11Q96JI7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 MIR4751-201ENST00000578027 74 ntBASIC14.98□□□□□ -0.01
SPG11Q96JI7 AC073592.5-201ENST00000624854 528 ntBASIC14.98□□□□□ -0.01
SPG11Q96JI7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 AC025580.3-201ENST00000617932 1424 ntBASIC14.98□□□□□ -0.01
SPG11Q96JI7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SPG11Q96JI7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPG11Q96JI7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 AC122714.2-201ENST00000502787 707 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms