Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.33■□□□□ 0.37
PDLIM5Q96HC4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PDLIM5Q96HC4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDLIM5Q96HC4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.33■□□□□ 0.37
PDLIM5Q96HC4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDLIM5Q96HC4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 AC016396.2-201ENST00000562575 1417 ntBASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 AC005332.1-201ENST00000577698 1310 ntBASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 AC246785.2-201ENST00000432512 513 ntBASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 AL138831.2-201ENST00000606564 490 ntBASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 CROCCP2-202ENST00000412962 2773 ntBASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.33■□□□□ 0.36
PDLIM5Q96HC4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 AC007967.3-201ENST00000434308 558 ntBASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 NTF6B-201ENST00000591913 560 ntBASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 AC116407.4-201ENST00000623319 1061 ntBASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 LYSMD4-203ENST00000378904 2122 ntBASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.32■□□□□ 0.36
PDLIM5Q96HC4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 AC122714.2-201ENST00000502787 707 ntBASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 AC011840.4-201ENST00000578471 627 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms