Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC47A1Q96FL8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC47A1Q96FL8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC47A1Q96FL8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
SLC47A1Q96FL8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC47A1Q96FL8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC47A1Q96FL8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC47A1Q96FL8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SLC47A1Q96FL8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC47A1Q96FL8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC47A1Q96FL8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC47A1Q96FL8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms