Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS33AQ96AX1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VPS33AQ96AX1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS33AQ96AX1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS33AQ96AX1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VPS33AQ96AX1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS33AQ96AX1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 INGX-201ENST00000359239 846 ntBASIC17.09■□□□□ 0.33
VPS33AQ96AX1 MIR1238-201ENST00000408483 83 ntBASIC17.09■□□□□ 0.33
VPS33AQ96AX1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS33AQ96AX1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.08■□□□□ 0.33
VPS33AQ96AX1 AC009949.1-201ENST00000623048 1830 ntBASIC17.08■□□□□ 0.33
VPS33AQ96AX1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 AC022898.2-201ENST00000616822 1312 ntBASIC17.08■□□□□ 0.32
VPS33AQ96AX1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 AC011270.2-201ENST00000624293 2550 ntBASIC17.08■□□□□ 0.32
VPS33AQ96AX1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS33AQ96AX1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 HLA-J-201ENST00000462773 1622 ntBASIC17.07■□□□□ 0.32
VPS33AQ96AX1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.07■□□□□ 0.32
VPS33AQ96AX1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms