Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TNFRSF25Q93038 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF25Q93038 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF25Q93038 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF25Q93038 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF25Q93038 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 POM121L3P-201ENST00000419331 1163 ntBASIC20.11■□□□□ 0.81
TNFRSF25Q93038 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 AC099336.1-202ENST00000602961 463 ntBASIC20.11■□□□□ 0.81
TNFRSF25Q93038 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF25Q93038 CROCCP2-202ENST00000412962 2773 ntBASIC20.11■□□□□ 0.81
TNFRSF25Q93038 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 AC108860.2-201ENST00000562760 2183 ntBASIC20.1■□□□□ 0.81
TNFRSF25Q93038 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 AC103564.2-201ENST00000432853 1299 ntBASIC20.1■□□□□ 0.81
TNFRSF25Q93038 HCG4P8-203ENST00000443049 980 ntBASIC20.1■□□□□ 0.81
TNFRSF25Q93038 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF25Q93038 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 STK25P1-201ENST00000585406 838 ntBASIC20.09■□□□□ 0.81
TNFRSF25Q93038 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.09■□□□□ 0.81
TNFRSF25Q93038 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TNFRSF25Q93038 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms