Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 AL163051.1-201ENST00000569214 1512 ntBASIC16.79■□□□□ 0.28
TM9SF4Q92544 LINC00896-202ENST00000609602 2128 ntBASIC16.79■□□□□ 0.28
TM9SF4Q92544 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 AL499627.1-201ENST00000569373 2188 ntBASIC16.78■□□□□ 0.28
TM9SF4Q92544 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 MIR149-201ENST00000384879 89 ntBASIC16.78■□□□□ 0.28
TM9SF4Q92544 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF4Q92544 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF4Q92544 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF4Q92544 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF4Q92544 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF4Q92544 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF4Q92544 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF4Q92544 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF4Q92544 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 AL591684.3-201ENST00000605187 298 ntBASIC16.77■□□□□ 0.28
TM9SF4Q92544 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TM9SF4Q92544 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF4Q92544 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF4Q92544 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF4Q92544 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF4Q92544 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF4Q92544 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF4Q92544 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.76■□□□□ 0.27
TM9SF4Q92544 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 AC135776.1-201ENST00000319817 2481 ntBASIC16.76■□□□□ 0.27
TM9SF4Q92544 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.76■□□□□ 0.27
TM9SF4Q92544 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 AC134043.2-201ENST00000624206 2238 ntBASIC16.76■□□□□ 0.27
TM9SF4Q92544 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.76■□□□□ 0.27
TM9SF4Q92544 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 AP000347.1-202ENST00000435868 847 ntBASIC16.76■□□□□ 0.27
TM9SF4Q92544 AC093909.1-201ENST00000504731 1122 ntBASIC16.76■□□□□ 0.27
TM9SF4Q92544 AC113404.2-201ENST00000507884 177 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms