Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 HMGA1P5-201ENST00000412453 271 ntBASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 AC106886.4-201ENST00000623557 2502 ntBASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 LYSMD4-203ENST00000378904 2122 ntBASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 AC005104.2-201ENST00000427818 678 ntBASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 AC024563.2-201ENST00000603282 481 ntBASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC44A1Q8WWI5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 AP000523.1-201ENST00000398242 1049 ntBASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 ECEL1P3-201ENST00000427961 737 ntBASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 SNORA78-201ENST00000459373 127 ntBASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 ECEL1P2-202ENST00000465689 757 ntBASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 NAPSB-206ENST00000562112 1266 ntBASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 AGGF1P2-201ENST00000426656 2106 ntBASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC44A1Q8WWI5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms