Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 TP73-AS1-210ENST00000637775 1455 ntBASIC30.3■■■□□ 2.44
TRIM41Q8WV44 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM41Q8WV44 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC30.29■■■□□ 2.44
TRIM41Q8WV44 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 AIRN-201ENST00000601203 4374 ntBASIC30.28■■■□□ 2.44
TRIM41Q8WV44 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 AC087641.1-201ENST00000557561 1021 ntBASIC30.28■■■□□ 2.44
TRIM41Q8WV44 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM41Q8WV44 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 TSEN15P1-201ENST00000423257 515 ntBASIC30.27■■■□□ 2.44
TRIM41Q8WV44 CRCP-205ENST00000431089 942 ntTSL 2 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 AC021087.4-201ENST00000563761 564 ntBASIC30.27■■■□□ 2.44
TRIM41Q8WV44 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 KRT8P47-201ENST00000604727 1398 ntBASIC30.27■■■□□ 2.44
TRIM41Q8WV44 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
TRIM41Q8WV44 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
TRIM41Q8WV44 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.44
TRIM41Q8WV44 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.44
TRIM41Q8WV44 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
TRIM41Q8WV44 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
TRIM41Q8WV44 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
TRIM41Q8WV44 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC30.26■■■□□ 2.44
TRIM41Q8WV44 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 COPE-211ENST00000600932 1144 ntTSL 5 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC30.26■■■□□ 2.43
TRIM41Q8WV44 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms