Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 STK25P1-201ENST00000585406 838 ntBASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3RF3Q8TEJ3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 AC003669.1-201ENST00000334569 611 ntBASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 AC140113.2-201ENST00000604370 208 ntBASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 AC006538.3-201ENST00000612495 578 ntBASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF3Q8TEJ3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 PMS2P7-201ENST00000506558 1336 ntBASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 ABALON-201ENST00000629058 1903 ntBASIC20.98■□□□□ 0.95
SH3RF3Q8TEJ3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 AC009947.1-201ENST00000444350 727 ntBASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 AC006557.2-201ENST00000592985 1240 ntBASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 AL589182.2-201ENST00000619332 1049 ntBASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms