Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 AC007967.3-201ENST00000434308 558 ntBASIC18.81■□□□□ 0.6
UBA3Q8TBC4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 MIR3652-201ENST00000579335 131 ntBASIC18.81■□□□□ 0.6
UBA3Q8TBC4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 AC099336.1-202ENST00000602961 463 ntBASIC18.81■□□□□ 0.6
UBA3Q8TBC4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.81■□□□□ 0.6
UBA3Q8TBC4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 AC097374.2-201ENST00000618617 1306 ntBASIC18.8■□□□□ 0.6
UBA3Q8TBC4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 KRT18P56-201ENST00000507275 550 ntBASIC18.8■□□□□ 0.6
UBA3Q8TBC4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 BNIP3P18-201ENST00000593976 575 ntBASIC18.8■□□□□ 0.6
UBA3Q8TBC4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 AC012313.10-201ENST00000623509 926 ntBASIC18.8■□□□□ 0.6
UBA3Q8TBC4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.8■□□□□ 0.6
UBA3Q8TBC4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 AC138894.3-201ENST00000603787 634 ntBASIC18.79■□□□□ 0.6
UBA3Q8TBC4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBA3Q8TBC4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 TP73-AS1-210ENST00000637775 1455 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms