Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 LINC00304-203ENST00000565008 1864 ntBASIC16.63■□□□□ 0.25
NUP43Q8NFH3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 TSPY22P-201ENST00000427496 604 ntBASIC16.63■□□□□ 0.25
NUP43Q8NFH3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 GUSBP12-201ENST00000513727 720 ntBASIC16.63■□□□□ 0.25
NUP43Q8NFH3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 AL136038.3-201ENST00000561909 1096 ntBASIC16.63■□□□□ 0.25
NUP43Q8NFH3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.63■□□□□ 0.25
NUP43Q8NFH3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUP43Q8NFH3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 FAM210CP-201ENST00000445714 574 ntBASIC16.62■□□□□ 0.25
NUP43Q8NFH3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 LINC01451-201ENST00000623792 534 ntBASIC16.62■□□□□ 0.25
NUP43Q8NFH3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 HLA-J-201ENST00000462773 1622 ntBASIC16.62■□□□□ 0.25
NUP43Q8NFH3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUP43Q8NFH3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 BX276092.7-203ENST00000637198 1536 ntBASIC16.61■□□□□ 0.25
NUP43Q8NFH3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 REXO1L11P-201ENST00000620964 1927 ntBASIC16.61■□□□□ 0.25
NUP43Q8NFH3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 AL031133.1-201ENST00000406807 723 ntBASIC16.61■□□□□ 0.25
NUP43Q8NFH3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.61■□□□□ 0.25
NUP43Q8NFH3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms