Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC16Q8NEE8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC16Q8NEE8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC16Q8NEE8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC16Q8NEE8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC16Q8NEE8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC16Q8NEE8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TTC16Q8NEE8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC16Q8NEE8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TTC16Q8NEE8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.64■□□□□ 0.58
TTC16Q8NEE8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TTC16Q8NEE8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TTC16Q8NEE8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TTC16Q8NEE8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 AF186996.4-201ENST00000467186 377 ntBASIC18.64■□□□□ 0.57
TTC16Q8NEE8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 AC112698.1-201ENST00000510299 916 ntBASIC18.64■□□□□ 0.57
TTC16Q8NEE8 AP001005.1-201ENST00000571755 1248 ntBASIC18.64■□□□□ 0.57
TTC16Q8NEE8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC16Q8NEE8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 WIZP1-201ENST00000531444 2299 ntBASIC18.63■□□□□ 0.57
TTC16Q8NEE8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 KRT18P65-201ENST00000439811 1286 ntBASIC18.63■□□□□ 0.57
TTC16Q8NEE8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 AC009533.2-201ENST00000543664 586 ntBASIC18.63■□□□□ 0.57
TTC16Q8NEE8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 AL773604.1-201ENST00000617417 272 ntBASIC18.63■□□□□ 0.57
TTC16Q8NEE8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC16Q8NEE8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.62■□□□□ 0.57
TTC16Q8NEE8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.62■□□□□ 0.57
TTC16Q8NEE8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms