Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 AC116407.4-201ENST00000623319 1061 ntBASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 AL358472.4-201ENST00000633140 710 ntBASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 KRT8P47-201ENST00000604727 1398 ntBASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SIMC1Q8NDZ2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 KRT18P55-202ENST00000578578 1546 ntBASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 TSPY12P-201ENST00000421279 868 ntBASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 KRT18P65-201ENST00000439811 1286 ntBASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SIMC1Q8NDZ2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 AC006116.8-202ENST00000587620 1550 ntBASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 AC068472.1-201ENST00000474589 881 ntBASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms