Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 KRT17P6-201ENST00000453795 1220 ntBASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 AC074051.2-201ENST00000565115 352 ntBASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB42Q8N4Z0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 KRT8P47-201ENST00000604727 1398 ntBASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 MIR3180-1-201ENST00000580374 94 ntBASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 MIR3180-3-201ENST00000584616 94 ntBASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 BX276092.7-203ENST00000637198 1536 ntBASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 NOC2LP1-202ENST00000452600 2235 ntBASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB42Q8N4Z0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 MIR3652-201ENST00000579335 131 ntBASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB42Q8N4Z0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms