Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC170Q8IYT3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 TSPY7P-201ENST00000431358 1114 ntBASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 AL157888.1-201ENST00000631930 593 ntBASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC170Q8IYT3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 MIR718-201ENST00000390190 70 ntBASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 AC005104.2-201ENST00000427818 678 ntBASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCDC170Q8IYT3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 BX276092.7-203ENST00000637198 1536 ntBASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC170Q8IYT3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 TNRC18P3-201ENST00000441896 2691 ntBASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC170Q8IYT3 AP000523.1-201ENST00000398242 1049 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms