Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 AC002558.1-201ENST00000488906 803 ntBASIC21.94■■□□□ 1.1
SMC5Q8IY18 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 AL136038.3-201ENST00000561909 1096 ntBASIC21.94■■□□□ 1.1
SMC5Q8IY18 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 AL139327.4-201ENST00000612362 153 ntBASIC21.94■■□□□ 1.1
SMC5Q8IY18 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC5Q8IY18 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC5Q8IY18 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMC5Q8IY18 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC5Q8IY18 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMC5Q8IY18 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC5Q8IY18 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC5Q8IY18 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMC5Q8IY18 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC5Q8IY18 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC5Q8IY18 AC125634.1-201ENST00000438758 1403 ntBASIC21.93■■□□□ 1.1
SMC5Q8IY18 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC5Q8IY18 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 AC019129.2-201ENST00000609837 1235 ntBASIC21.93■■□□□ 1.1
SMC5Q8IY18 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 AC116353.5-201ENST00000638148 1699 ntBASIC21.93■■□□□ 1.1
SMC5Q8IY18 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.93■■□□□ 1.1
SMC5Q8IY18 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC5Q8IY18 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMC5Q8IY18 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SMC5Q8IY18 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.92■■□□□ 1.1
SMC5Q8IY18 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.92■■□□□ 1.1
SMC5Q8IY18 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.92■■□□□ 1.1
SMC5Q8IY18 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SMC5Q8IY18 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 SLC25A1P3-201ENST00000395415 828 ntBASIC21.92■■□□□ 1.1
SMC5Q8IY18 TSPY22P-201ENST00000427496 604 ntBASIC21.92■■□□□ 1.1
SMC5Q8IY18 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.92■■□□□ 1.1
SMC5Q8IY18 AC007967.3-201ENST00000434308 558 ntBASIC21.92■■□□□ 1.1
SMC5Q8IY18 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.92■■□□□ 1.1
SMC5Q8IY18 AC005336.2-201ENST00000593183 939 ntBASIC21.92■■□□□ 1.1
SMC5Q8IY18 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.92■■□□□ 1.1
SMC5Q8IY18 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SMC5Q8IY18 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.92■■□□□ 1.1
SMC5Q8IY18 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC5Q8IY18 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.92■■□□□ 1.1
SMC5Q8IY18 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.91■■□□□ 1.1
SMC5Q8IY18 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMC5Q8IY18 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMC5Q8IY18 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SMC5Q8IY18 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC5Q8IY18 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC5Q8IY18 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMC5Q8IY18 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.91■■□□□ 1.1
SMC5Q8IY18 TMPOP1-202ENST00000424642 1267 ntBASIC21.91■■□□□ 1.1
SMC5Q8IY18 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.91■■□□□ 1.1
SMC5Q8IY18 AL138831.2-201ENST00000606564 490 ntBASIC21.91■■□□□ 1.1
SMC5Q8IY18 AL592071.1-201ENST00000611956 408 ntBASIC21.91■■□□□ 1.1
SMC5Q8IY18 AIRN-201ENST00000601203 4374 ntBASIC21.91■■□□□ 1.1
SMC5Q8IY18 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.91■■□□□ 1.1
SMC5Q8IY18 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SMC5Q8IY18 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.91■■□□□ 1.1
SMC5Q8IY18 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC5Q8IY18 AC099398.1-201ENST00000567919 2776 ntBASIC21.91■■□□□ 1.1
SMC5Q8IY18 AC106820.2-201ENST00000563775 3264 ntBASIC21.91■■□□□ 1.1
SMC5Q8IY18 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.91■■□□□ 1.1
SMC5Q8IY18 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SMC5Q8IY18 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms