Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 AC093512.1-201ENST00000617969 520 ntBASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 MTCL1P1-201ENST00000446207 792 ntBASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 ALG1L5P-201ENST00000482043 771 ntBASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 MIR149-201ENST00000384879 89 ntBASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 AC093028.1-201ENST00000622998 982 ntBASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RP1L1Q8IWN7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 PMPCAP1-201ENST00000508114 1576 ntBASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 AC005332.7-201ENST00000614046 2005 ntBASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 PRSS29P-201ENST00000440800 595 ntBASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 MIR4469-201ENST00000583919 79 ntBASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 AC011467.4-201ENST00000594891 528 ntBASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 AC068587.9-201ENST00000641814 219 ntBASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.04■□□□□ 0.16
RP1L1Q8IWN7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RP1L1Q8IWN7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
RP1L1Q8IWN7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RP1L1Q8IWN7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RP1L1Q8IWN7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RP1L1Q8IWN7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RP1L1Q8IWN7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.03■□□□□ 0.16
RP1L1Q8IWN7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RP1L1Q8IWN7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RP1L1Q8IWN7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms