Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 FAM8A6P-201ENST00000407496 1135 ntBASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 AP003733.1-201ENST00000491725 852 ntBASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 AC112698.1-201ENST00000510299 916 ntBASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 VENTXP5-201ENST00000523979 775 ntBASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 AC022211.2-201ENST00000585075 2527 ntBASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC83Q8IWF9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 HBZP1-201ENST00000354915 429 ntBASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 AC211429.1-201ENST00000415277 523 ntBASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 TSPY5P-201ENST00000426936 936 ntBASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 ZNF444P1-201ENST00000559497 298 ntBASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 LINC01451-201ENST00000623792 534 ntBASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC83Q8IWF9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 PRORSD1P-202ENST00000563365 2154 ntBASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 MIR662-201ENST00000384847 95 ntBASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 AC112907.2-201ENST00000448639 330 ntBASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 AL353692.3-201ENST00000407031 1396 ntBASIC20.85■□□□□ 0.93
CCDC83Q8IWF9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms