Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC112698.1-201ENST00000510299 916 ntBASIC16.44■□□□□ 0.22
VRK2Q86Y07 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VRK2Q86Y07 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.44■□□□□ 0.22
VRK2Q86Y07 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
VRK2Q86Y07 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.44■□□□□ 0.22
VRK2Q86Y07 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.44■□□□□ 0.22
VRK2Q86Y07 HYMAI.1-201ENST00000620949 238 ntBASIC16.44■□□□□ 0.22
VRK2Q86Y07 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.44■□□□□ 0.22
VRK2Q86Y07 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
VRK2Q86Y07 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VRK2Q86Y07 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK2Q86Y07 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK2Q86Y07 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK2Q86Y07 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK2Q86Y07 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK2Q86Y07 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 AL138688.1-201ENST00000624851 1594 ntBASIC16.43■□□□□ 0.22
VRK2Q86Y07 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 CROCCP2-202ENST00000412962 2773 ntBASIC16.43■□□□□ 0.22
VRK2Q86Y07 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 DDX43P3-201ENST00000441064 443 ntBASIC16.43■□□□□ 0.22
VRK2Q86Y07 AC104076.2-201ENST00000448912 469 ntBASIC16.43■□□□□ 0.22
VRK2Q86Y07 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.43■□□□□ 0.22
VRK2Q86Y07 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 AL023806.1-201ENST00000603994 1649 ntBASIC16.43■□□□□ 0.22
VRK2Q86Y07 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VRK2Q86Y07 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VRK2Q86Y07 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 AC092647.4-201ENST00000457211 535 ntBASIC16.42■□□□□ 0.22
VRK2Q86Y07 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 GPR32P1-201ENST00000601788 811 ntBASIC16.42■□□□□ 0.22
VRK2Q86Y07 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 LINC01311-201ENST00000565162 1445 ntBASIC16.42■□□□□ 0.22
VRK2Q86Y07 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VRK2Q86Y07 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK2Q86Y07 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms