Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL138966.2-201ENST00000621997 464 ntBASIC15.84■□□□□ 0.13
LRRC28Q86X40 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC28Q86X40 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC28Q86X40 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRRC28Q86X40 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRRC28Q86X40 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC28Q86X40 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC28Q86X40 OR6D1P-203ENST00000641209 4860 ntBASIC15.83■□□□□ 0.13
LRRC28Q86X40 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.83■□□□□ 0.13
LRRC28Q86X40 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC28Q86X40 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 MIR1224-201ENST00000408193 85 ntBASIC15.83■□□□□ 0.12
LRRC28Q86X40 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 RCC2P3-201ENST00000418112 1537 ntBASIC15.83■□□□□ 0.12
LRRC28Q86X40 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC28Q86X40 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.83■□□□□ 0.12
LRRC28Q86X40 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC28Q86X40 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 AL355312.1-201ENST00000407115 2176 ntBASIC15.82■□□□□ 0.12
LRRC28Q86X40 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.82■□□□□ 0.12
LRRC28Q86X40 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LRRC28Q86X40 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC28Q86X40 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms