Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 AL121894.2-201ENST00000602977 491 ntBASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
LRRTM4Q86VH4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 AKR1C7P-201ENST00000305623 895 ntBASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRTM4Q86VH4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 AC103564.2-201ENST00000432853 1299 ntBASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM4Q86VH4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms