Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.43■□□□□ 0.22
TUBA1AQ71U36 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBA1AQ71U36 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 MCCD1P1-208ENST00000445732 328 ntBASIC16.42■□□□□ 0.22
TUBA1AQ71U36 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 AC068587.9-201ENST00000641814 219 ntBASIC16.42■□□□□ 0.22
TUBA1AQ71U36 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TUBA1AQ71U36 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TUBA1AQ71U36 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TUBA1AQ71U36 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TUBA1AQ71U36 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBA1AQ71U36 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBA1AQ71U36 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBA1AQ71U36 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBA1AQ71U36 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBA1AQ71U36 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBA1AQ71U36 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TUBA1AQ71U36 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms