Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 AC103564.2-201ENST00000432853 1299 ntBASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 AP000347.1-202ENST00000435868 847 ntBASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 AC073648.2-201ENST00000510116 352 ntBASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 AC135776.1-201ENST00000319817 2481 ntBASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
H3F3CQ6NXT2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
H3F3CQ6NXT2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.22
H3F3CQ6NXT2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 AC079776.4-201ENST00000511039 504 ntBASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 AD001527.2-201ENST00000622994 785 ntBASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 AL356309.3-201ENST00000624132 1934 ntBASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
H3F3CQ6NXT2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 AL022342.1-201ENST00000400363 863 ntBASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 SART3-203ENST00000546611 1184 ntBASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 AC021087.4-201ENST00000563761 564 ntBASIC16.38■□□□□ 0.21
H3F3CQ6NXT2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms