Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.19■□□□□ 0.82
PPP4R3AQ6IN85 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 AC010460.3-201ENST00000511359 1579 ntBASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 AC007967.3-201ENST00000434308 558 ntBASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 NUS1P1-201ENST00000446295 882 ntBASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 PKD1P1-201ENST00000458669 6805 ntBASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.18■□□□□ 0.82
PPP4R3AQ6IN85 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 BNIP3P18-201ENST00000593976 575 ntBASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.17■□□□□ 0.82
PPP4R3AQ6IN85 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 COX5BP2-201ENST00000392354 334 ntBASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 POM121L3P-201ENST00000419331 1163 ntBASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 MINOS1P3-201ENST00000457048 203 ntBASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 MIR3652-201ENST00000579335 131 ntBASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 AC011467.2-201ENST00000598425 242 ntBASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 TP73-AS1-210ENST00000637775 1455 ntBASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PPP4R3AQ6IN85 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms