Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 DDX43P3-201ENST00000441064 443 ntBASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 MTCL1P1-201ENST00000446207 792 ntBASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 AC068472.1-201ENST00000474589 881 ntBASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 RNF126P1-202ENST00000569893 925 ntBASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 AL590326.2-201ENST00000625139 305 ntBASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST2H2AA3Q6FI13 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 TSPY22P-201ENST00000427496 604 ntBASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 SPDYE13P-201ENST00000445314 798 ntBASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HIST2H2AA3Q6FI13 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 NTF6B-201ENST00000591913 560 ntBASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 AL121956.5-201ENST00000625261 221 ntBASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HIST2H2AA3Q6FI13 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H2AA3Q6FI13 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.16■□□□□ 0.34
HIST2H2AA3Q6FI13 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.16■□□□□ 0.34
HIST2H2AA3Q6FI13 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HIST2H2AA3Q6FI13 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.16■□□□□ 0.34
HIST2H2AA3Q6FI13 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H2AA3Q6FI13 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HIST2H2AA3Q6FI13 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.16■□□□□ 0.34
HIST2H2AA3Q6FI13 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms