Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 AL355355.2-201ENST00000442321 338 ntBASIC17.16■□□□□ 0.34
RNF220Q5VTB9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 AC026471.5-201ENST00000615068 467 ntBASIC17.16■□□□□ 0.34
RNF220Q5VTB9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 AC008556.1-201ENST00000610908 2040 ntBASIC17.15■□□□□ 0.34
RNF220Q5VTB9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 AP005242.2-201ENST00000580065 1175 ntBASIC17.15■□□□□ 0.34
RNF220Q5VTB9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.15■□□□□ 0.34
RNF220Q5VTB9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF220Q5VTB9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 AL023284.2-201ENST00000405850 579 ntBASIC17.14■□□□□ 0.33
RNF220Q5VTB9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 MCCD1P1-208ENST00000445732 328 ntBASIC17.14■□□□□ 0.33
RNF220Q5VTB9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 Z99916.2-201ENST00000604037 246 ntBASIC17.14■□□□□ 0.33
RNF220Q5VTB9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF220Q5VTB9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 GPAT2P1-201ENST00000444924 1672 ntBASIC17.13■□□□□ 0.33
RNF220Q5VTB9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms