Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 ENSA-206ENST00000361631 725 ntTSL 2 BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 MYCLP1-201ENST00000372451 1075 ntBASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 PAWRP1-201ENST00000451083 565 ntBASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 AC007064.4-201ENST00000637740 555 ntBASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
CDC42BPAQ5VT25 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 ACTG1P14-201ENST00000446382 1122 ntBASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 AC005498.2-205ENST00000593218 784 ntBASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 SLC25A24-204ENST00000569674 2357 ntBASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPAQ5VT25 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 SLC25A6P2-201ENST00000497974 877 ntBASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 AC107918.2-201ENST00000530817 355 ntBASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 CCND1-203ENST00000536559 553 ntTSL 3 BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPAQ5VT25 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPAQ5VT25 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 USP49-202ENST00000373010 2446 ntTSL 5 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 NABP1-203ENST00000409510 843 ntTSL 5 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 FAM8A3P-201ENST00000427218 844 ntBASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 AP000997.3-201ENST00000623333 2250 ntBASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC26.57■■□□□ 1.84
CDC42BPAQ5VT25 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms