Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 AC022144.1-201ENST00000602255 1580 ntBASIC17.09■□□□□ 0.33
RIF1Q5UIP0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 GNAS-203ENST00000306120 1878 ntBASIC17.08■□□□□ 0.33
RIF1Q5UIP0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 MIR658-201ENST00000385210 100 ntBASIC17.08■□□□□ 0.33
RIF1Q5UIP0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 BCYRN1-201ENST00000418539 200 ntBASIC17.08■□□□□ 0.33
RIF1Q5UIP0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 AL590560.3-201ENST00000623350 461 ntBASIC17.08■□□□□ 0.33
RIF1Q5UIP0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RIF1Q5UIP0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 RBPMS2P1-201ENST00000437762 623 ntBASIC17.08■□□□□ 0.32
RIF1Q5UIP0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RIF1Q5UIP0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 AC138969.3-201ENST00000546612 1459 ntBASIC17.07■□□□□ 0.32
RIF1Q5UIP0 AC138932.2-201ENST00000548268 1459 ntBASIC17.07■□□□□ 0.32
RIF1Q5UIP0 AC126755.4-201ENST00000549796 1459 ntBASIC17.07■□□□□ 0.32
RIF1Q5UIP0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 AL355306.1-201ENST00000415580 579 ntBASIC17.07■□□□□ 0.32
RIF1Q5UIP0 TREML5P-201ENST00000421694 576 ntBASIC17.07■□□□□ 0.32
RIF1Q5UIP0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 CXCL1P1-201ENST00000502804 216 ntBASIC17.07■□□□□ 0.32
RIF1Q5UIP0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RIF1Q5UIP0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 UXT-AS1-201ENST00000590504 1525 ntBASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AL353593.2-201ENST00000602529 1483 ntBASIC17.06■□□□□ 0.32
RIF1Q5UIP0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AC084121.4-201ENST00000641598 221 ntBASIC17.06■□□□□ 0.32
RIF1Q5UIP0 AF228730.8-201ENST00000642140 221 ntBASIC17.06■□□□□ 0.32
RIF1Q5UIP0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.06■□□□□ 0.32
RIF1Q5UIP0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms