Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.36■□□□□ 0.85
USH1GQ495M9 ABALON-201ENST00000629058 1903 ntBASIC20.36■□□□□ 0.85
USH1GQ495M9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.36■□□□□ 0.85
USH1GQ495M9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.36■□□□□ 0.85
USH1GQ495M9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.36■□□□□ 0.85
USH1GQ495M9 NKAPP1-205ENST00000585790 367 ntBASIC20.36■□□□□ 0.85
USH1GQ495M9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.36■□□□□ 0.85
USH1GQ495M9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.36■□□□□ 0.85
USH1GQ495M9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.36■□□□□ 0.85
USH1GQ495M9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
USH1GQ495M9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.36■□□□□ 0.85
USH1GQ495M9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
USH1GQ495M9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.36■□□□□ 0.85
USH1GQ495M9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.36■□□□□ 0.85
USH1GQ495M9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.35■□□□□ 0.85
USH1GQ495M9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
USH1GQ495M9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.35■□□□□ 0.85
USH1GQ495M9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.35■□□□□ 0.85
USH1GQ495M9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
USH1GQ495M9 AL590627.1-203ENST00000421194 1026 ntBASIC20.35■□□□□ 0.85
USH1GQ495M9 RPS2P1-201ENST00000434010 821 ntBASIC20.35■□□□□ 0.85
USH1GQ495M9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.35■□□□□ 0.85
USH1GQ495M9 BX005266.1-201ENST00000473402 457 ntBASIC20.35■□□□□ 0.85
USH1GQ495M9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.35■□□□□ 0.85
USH1GQ495M9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.35■□□□□ 0.85
USH1GQ495M9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 AC116407.2-201ENST00000613639 860 ntBASIC20.35■□□□□ 0.85
USH1GQ495M9 MIR7706-201ENST00000613747 67 ntBASIC20.35■□□□□ 0.85
USH1GQ495M9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.35■□□□□ 0.85
USH1GQ495M9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
USH1GQ495M9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
USH1GQ495M9 AC004817.3-201ENST00000602957 2129 ntBASIC20.35■□□□□ 0.85
USH1GQ495M9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USH1GQ495M9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.35■□□□□ 0.85
USH1GQ495M9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USH1GQ495M9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
USH1GQ495M9 AC138028.4-201ENST00000564984 1845 ntBASIC20.34■□□□□ 0.85
USH1GQ495M9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
USH1GQ495M9 PMPCAP1-201ENST00000508114 1576 ntBASIC20.34■□□□□ 0.85
USH1GQ495M9 FLJ13224-201ENST00000313737 1514 ntBASIC20.34■□□□□ 0.85
USH1GQ495M9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.34■□□□□ 0.85
USH1GQ495M9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
USH1GQ495M9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.34■□□□□ 0.85
USH1GQ495M9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
USH1GQ495M9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
USH1GQ495M9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
USH1GQ495M9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USH1GQ495M9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USH1GQ495M9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.34■□□□□ 0.85
USH1GQ495M9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.34■□□□□ 0.85
USH1GQ495M9 AD001527.2-201ENST00000622994 785 ntBASIC20.34■□□□□ 0.85
USH1GQ495M9 AL139288.1-201ENST00000623748 933 ntBASIC20.34■□□□□ 0.85
USH1GQ495M9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
USH1GQ495M9 HTR7P1-202ENST00000624664 4411 ntBASIC20.34■□□□□ 0.85
USH1GQ495M9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.34■□□□□ 0.85
USH1GQ495M9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USH1GQ495M9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
USH1GQ495M9 BCL2-203ENST00000589955 5011 ntBASIC20.34■□□□□ 0.85
USH1GQ495M9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USH1GQ495M9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
USH1GQ495M9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.34■□□□□ 0.85
USH1GQ495M9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.34■□□□□ 0.85
USH1GQ495M9 AC243591.1-201ENST00000452967 1364 ntBASIC20.34■□□□□ 0.85
USH1GQ495M9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
USH1GQ495M9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USH1GQ495M9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
USH1GQ495M9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.33■□□□□ 0.85
USH1GQ495M9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USH1GQ495M9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
USH1GQ495M9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USH1GQ495M9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USH1GQ495M9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
USH1GQ495M9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.33■□□□□ 0.85
USH1GQ495M9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms