Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDH17Q12864 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH17Q12864 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDH17Q12864 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.96■□□□□ 0.46
CDH17Q12864 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDH17Q12864 AC141586.5-201ENST00000624546 2050 ntBASIC17.95■□□□□ 0.46
CDH17Q12864 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CDH17Q12864 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH17Q12864 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDH17Q12864 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH17Q12864 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDH17Q12864 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH17Q12864 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH17Q12864 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH17Q12864 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH17Q12864 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH17Q12864 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDH17Q12864 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 AL645608.8-201ENST00000606034 2086 ntBASIC17.95■□□□□ 0.46
CDH17Q12864 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH17Q12864 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH17Q12864 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 AC020916.1-201ENST00000587762 1774 ntBASIC17.94■□□□□ 0.46
CDH17Q12864 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH17Q12864 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH17Q12864 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH17Q12864 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH17Q12864 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDH17Q12864 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH17Q12864 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH17Q12864 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH17Q12864 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.93■□□□□ 0.46
CDH17Q12864 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDH17Q12864 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH17Q12864 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDH17Q12864 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH17Q12864 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH17Q12864 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH17Q12864 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH17Q12864 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms